The detailed information of tRNA gene sequence


Sequence ID>SRA1008487
Genome IDSRR020490.387638
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 269
End posion on genome 182
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaaagtcta
tRNA gene sequence 
GCGGGGGTCGCATAGTCTGGCCATTGCGTTGGATTGCTAATCCAATGGGATTTATCCCAC
GGGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
ttataatttc
Secondary structure (Cloverleaf model)
>SRA1008487	Ser	GCT
                   a      GCCA ttataatttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G G G G G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGGATTTATCCCAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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