The detailed information of tRNA gene sequence


Sequence ID>SRA1008516
Genome IDSRR020490.405222
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggtttcatt
tRNA gene sequence 
CGGGGCGTGGCGCAGTTTGGTAGCGCGGGTGCTTTGGGAGCACTAGGTCGCAGGTTCGAA
TCCTGTCGCCCCGACTA
Downstream region at tRNA end position 
ggttttcaca
Secondary structure (Cloverleaf model)
>SRA1008516	Pro	TGG
                   t      ACTA ggttttcaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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