The detailed information of tRNA gene sequence


Sequence ID>SRA1008519
Genome IDSRR020490.406325
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 168
End posion on genome 79
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctaaaaatca
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTTAATGGGCACGCCTGGAAAGCGTGTGTGGGTGCAAGCTCA
CCGCAGGTTCGAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
ttttatttta
Secondary structure (Cloverleaf model)
>SRA1008519	Ser	GGA
                   a      GCCA ttttatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       G A C C       G C A G G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TGTGGGTGCAAGCTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK