The detailed information of tRNA gene sequence


Sequence ID>SRA1008537
Genome IDSRR020490.410219
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 88
End posion on genome 7
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctacaagtag
tRNA gene sequence 
GGCAGCATGGCCGAGTGGTTAAGGCGTTGGACTTGAAATCCAATGGGGTCTCCCCGCGTA
GGTTCAAATCCTGCTGCTGTCGgta
Downstream region at tRNA end position 
tttnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1008537	Ser	TGA
                   g      Ggta tttnnnnnnn
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    G       G C C G       G T A G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGGTCTCCCCGC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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