The detailed information of tRNA gene sequence


Sequence ID>SRA1008539
Genome IDSRR020490.411329
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 71
End posion on genome 147
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttaaaattt
tRNA gene sequence 
GGCGTCGTACCCAAGTGGTTTAAGGGACCGGTTTGCAAAACCGTTATTCGTCGGTTCGAA
TCCGACCGACGCCTCAA
Downstream region at tRNA end position 
tgtgttgccc
Secondary structure (Cloverleaf model)
>SRA1008539	Cys	GCA
                   t      TCAA tgtgttgccc
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A G C C     A
      T G A        A      | | | | |     G
    G       A C C C       G T C G G     C
    G         | | |                 T T
    T       A G G G
      T T A        A     TATTC
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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