The detailed information of tRNA gene sequence


Sequence ID>SRA1008557
Genome IDSRR020490.416933
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 115
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatgaaaat
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCATCGGAATCATAATCCGAGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACat
Downstream region at tRNA end position 
taattaaatt
Secondary structure (Cloverleaf model)
>SRA1008557	Met	CAT
                   t      ACat taattaaatt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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