The detailed information of tRNA gene sequence


Sequence ID>SRA1008596
Genome IDSRR020490.426627
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 97
End posion on genome 171
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcaacgattT
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCGAGT
CCGCTTGGCTCCATaa
Downstream region at tRNA end position 
gggtttaggt
Secondary structure (Cloverleaf model)
>SRA1008596	Ala	GGC
                   T      ATaa gggtttaggt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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