The detailed information of tRNA gene sequence


Sequence ID>SRA1008607
Genome IDSRR020490.430474
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 112
End posion on genome 183
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttttaaattc
tRNA gene sequence 
GCCGATATAGCTCAGCGGTAGAGCAACTGTCTCGTAAATAGTAGGTCATTGGTTCAATTC
CAATTATCGGCAttt
Downstream region at tRNA end position 
caaaaacaat
Secondary structure (Cloverleaf model)
>SRA1008607	Thr	CGT
                   c      Attt caaaaacaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     T A A C C     A
        G A        A      | | | | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G + T
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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