The detailed information of tRNA gene sequence


Sequence ID>SRA1008620
Genome IDSRR020490.436207
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 54
End posion on genome 130
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aggaatcagG
tRNA gene sequence 
GGGGAGTTAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGAGGTCAGCGGTTCGACC
CCGCTATCCTCCACCA
Downstream region at tRNA end position 
gaccgtggtt
Secondary structure (Cloverleaf model)
>SRA1008620	Ala	TGC
                   G      ACCA gaccgtggtt
                     G - C
                     G - C
                     G + T
                     G - C
                     A   C
                     G + T
                     T - A          C C
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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