The detailed information of tRNA gene sequence


Sequence ID>SRA1008631
Genome IDSRR020490.440793
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 161
End posion on genome 71
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgctgactt
tRNA gene sequence 
GGAGAGGTGACTGAGTGGCCTAAAAGTGCTCGCCTGCTAAGCGAGTGGGGAAGAAATTCC
CTCGAGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
tgcgcccgta
Secondary structure (Cloverleaf model)
>SRA1008631	Ser	GCT
                   t      GCAA tgcgcccgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    G T G A        G      | | | | |     G
  G         G T C A       G A G G G     C
  C           | | |                 T T
  C         A A G T
    T A A          G     TGGGGAAGAAATTCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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