The detailed information of tRNA gene sequence


Sequence ID>SRA1008642
Genome IDSRR020490.443409
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 264
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attagacgtg
tRNA gene sequence 
CGGGCTGTGGCTCAGCTTGGCTAGAGCGCCTGGTTTGGGACCAGGAGGTCGTGAGTTCGA
ATCTCACCAGCCCGACgc
Downstream region at tRNA end position 
acggnnnnnn
Secondary structure (Cloverleaf model)
>SRA1008642	Pro	TGG
                   g      ACgc acggnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C A C T C     A
    T C G A        G      | | | | |     G
  T         C T C G       G T G A G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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