The detailed information of tRNA gene sequence


Sequence ID>SRA1008646
Genome IDSRR020490.444002
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 28
End posion on genome 104
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggcaccatgt
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAA
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
ctttatcttg
Secondary structure (Cloverleaf model)
>SRA1008646	Asp	GTC
                   t      GCCA ctttatcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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