The detailed information of tRNA gene sequence


Sequence ID>SRA1008652
Genome IDSRR020490.445681
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 196
End posion on genome 267
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caattggcaa
tRNA gene sequence 
GCGTTGTTGGTCTAGTGGTTAGGATATCTGCCTTCCAAGCAGATGGCCCGGGTTCGATTC
CCGGACAACGCAttt
Downstream region at tRNA end position 
ttaaaaagtt
Secondary structure (Cloverleaf model)
>SRA1008652	Gly	TCC
                   a      Attt ttaaaaagtt
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T T
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          A     TGGC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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