The detailed information of tRNA gene sequence


Sequence ID>SRA1008661
Genome IDSRR020490.448907
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 69
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
accacttttt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGAAGAGCGCCACAATGGCATTGTGGAGGTCGTCGGTTCGATC
CCGATCGGCTCCACCA
Downstream region at tRNA end position 
tcctctcccc
Secondary structure (Cloverleaf model)
>SRA1008661	Ala	GGC
                   t      ACCA tcctctcccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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