The detailed information of tRNA gene sequence


Sequence ID>SRA1008668
Genome IDSRR020490.450444
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 102
End posion on genome 26
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttttgtcgc
tRNA gene sequence 
GGACCGGTAGTTCAGCTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAA
TCCCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tataactctc
Secondary structure (Cloverleaf model)
>SRA1008668	Asp	GTC
                   c      GCCA tataactctc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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