The detailed information of tRNA gene sequence


Sequence ID>SRA1008682
Genome IDSRR020490.457702
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 188
End posion on genome 114
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aatatgtgcg
tRNA gene sequence 
GCCCGCATAGCTCAGTGGCAGAGCACTTTCTTGGTAAGAAAGAGGTCAGCAGTTCAAATC
TGCTTGTGGGCTCCA
Downstream region at tRNA end position 
gaatattgga
Secondary structure (Cloverleaf model)
>SRA1008682	Thr	GGT
                   g      TCCA gaatattgga
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     C - G
                     A - T          T A
                    T     T C G T C     A
        G A        A      | | | | |     A
      T     C T C G       A G C A G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    T - A
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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