The detailed information of tRNA gene sequence


Sequence ID>SRA1008703
Genome IDSRR020490.464595
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 18
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaaccagca
tRNA gene sequence 
GGAGAGGTGGCCGAGGGGTTTAAGGCGCACGCTTGGAAAGCGTGTATAGGGTTTACTCTA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCT
Downstream region at tRNA end position 
aataaaaaaa
Secondary structure (Cloverleaf model)
>SRA1008703	Ser	GGA
                   a      GCCT aataaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      G G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATAGGGTTTACTCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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