The detailed information of tRNA gene sequence


Sequence ID>SRA1008712
Genome IDSRR020490.468979
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 88
End posion on genome 174
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatataaaca
tRNA gene sequence 
GCCAGGGTCGCATAGTCCGGTATTGCGGTGGCCTCGAAAGCCACTGGGAGTAATCCCTCG
GGAGTTCAAATCTCTCCCCTGGCGCCA
Downstream region at tRNA end position 
gaattttata
Secondary structure (Cloverleaf model)
>SRA1008712	Ser	CGA
                   a      GCCA gaattttata
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        C      | + | | |     A
    C       T A C G       G G G A G     C
    C         | | |                 T T
    G       T T G C
      G T A        G     TGGGAGTAATCCCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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