The detailed information of tRNA gene sequence


Sequence ID>SRA1008742
Genome IDSRR020491.9792
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 98
End posion on genome 188
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaatcttcc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGCTGAATGCACTGGTCTTGAAAACCAAGCAAGGGCTAATACCC
TTCCAGGGTTCAAATCCCTGTCCCTCCACCA
Downstream region at tRNA end position 
ctcaaatcat
Secondary structure (Cloverleaf model)
>SRA1008742	Ser	TGA
                   c      ACCA ctcaaatcat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       C A G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     GCAAGGGCTAATACCCTTC
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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