The detailed information of tRNA gene sequence


Sequence ID>SRA1008751
Genome IDSRR020491.14549
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 78
End posion on genome 167
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaagtgc
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGCCGATTCGGCGTGCTTGGAAAGCACGTGTACCGGCAACGGTA
CCATGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tttgctaagc
Secondary structure (Cloverleaf model)
>SRA1008751	Ser	GGA
                   c      GCCA tttgctaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       A T G G G     C
    G       + | | |                 T T
    C       T T C G
      C G A        G     TGTACCGGCAACGGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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