The detailed information of tRNA gene sequence


Sequence ID>SRA1008771
Genome IDSRR020491.20629
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 164
End posion on genome 239
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
accacctgat
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCAAAT
CCGCTATCCTCCACCA
Downstream region at tRNA end position 
gttttaatct
Secondary structure (Cloverleaf model)
>SRA1008771	Ala	TGC
                   t      ACCA gttttaatct
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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