The detailed information of tRNA gene sequence


Sequence ID>SRA1008775
Genome IDSRR020491.20903
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 118
End posion on genome 42
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaatatcac
tRNA gene sequence 
GGCTATGTAGCTCAGCTGGTTAGAGCACAGCATTCATAATGCTGGGGTCGGTGGTTCAAG
TCCACCCATAGCTACCA
Downstream region at tRNA end position 
aacaatagtc
Secondary structure (Cloverleaf model)
>SRA1008775	Met	CAT
                   c      ACCA aacaatagtc
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C C A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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