The detailed information of tRNA gene sequence


Sequence ID>SRA1008777
Genome IDSRR020491.21313
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 213
End posion on genome 139
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
tttattattA
tRNA gene sequence 
GGCTTTATGGCTCAGTTGGTAGAGCATTCCCCTAGTAAGGGAAAGGTCCTGAGTTCAATT
CTCGGTGAAGCCTAat
Downstream region at tRNA end position 
ggggttgtag
Secondary structure (Cloverleaf model)
>SRA1008777	Thr	AGT
                   A      TAat ggggttgtag
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     T + G
                     A - T          T T
                    T     G G C T C     A
      T G A        G      | + | | |     A
    T       C T C G       C T G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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