The detailed information of tRNA gene sequence


Sequence ID>SRA1008780
Genome IDSRR020491.23282
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 86
End posion on genome 13
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcagcaccac
tRNA gene sequence 
GGCCGGGTGGCAGAATGGCTATGCGGAGGACTGCAAATCCTTTTACGTCGGTTCGATTCC
GGCCCCGGCCTCCA
Downstream region at tRNA end position 
ttctaaatca
Secondary structure (Cloverleaf model)
>SRA1008780	Cys	GCA
                   c      TCCA ttctaaatca
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C G G C C     A
        A A        G      | + | | |     G
      T     G A C G       G T C G G     C
      G       | | |                 T T
      G     A T G C
        C T        G     TTAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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