The detailed information of tRNA gene sequence


Sequence ID>SRA1008798
Genome IDSRR020491.27849
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 90
End posion on genome 163
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
tctgtgaaaa
tRNA gene sequence 
GCTCTTATAGCTCAGTTGGTCAGAGCGTACGGCTAATAACCGTAAGGTCCGCGGTTCAAG
CCCGCGTGGGAGCAttt
Downstream region at tRNA end position 
ttcatcgctc
Secondary structure (Cloverleaf model)
>SRA1008798	Ile	AAT
                   a      Attt ttcatcgctc
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     T + G
                     A - T          C G
                    T     G C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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