The detailed information of tRNA gene sequence


Sequence ID>SRA1008805
Genome IDSRR020491.30721
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 172
End posion on genome 247
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagttcaaaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGT
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
anaaaacacc
Secondary structure (Cloverleaf model)
>SRA1008805	Ala	TGC
                   a      ACCA anaaaacacc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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