The detailed information of tRNA gene sequence


Sequence ID>SRA1008806
Genome IDSRR020491.31590
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 77
End posion on genome 5
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttgttctgtt
tRNA gene sequence 
GCCCCCGTAGCTCAGCGGATAGAGCACTGGCCTCCGGAGCCAGGGGCGTGGGTTCGAGTC
CCGCCGGGGGTACtc
Downstream region at tRNA end position 
ctnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1008806	Arg	CCG
                   t      ACtc ctnnnnnnnn
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | + | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GGGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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