The detailed information of tRNA gene sequence


Sequence ID>SRA1008832
Genome IDSRR020491.38189
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 74
End posion on genome 150
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccccacgg
tRNA gene sequence 
GCCAGGGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGGGTCGCCGGTTCAAG
TCCGGCCCCTGGTACCA
Downstream region at tRNA end position 
tttcaaacgg
Secondary structure (Cloverleaf model)
>SRA1008832	Met	CAT
                   g      ACCA tttcaaacgg
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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