The detailed information of tRNA gene sequence


Sequence ID>SRA1008833
Genome IDSRR020491.38199
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 145
End posion on genome 219
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaattttgca
tRNA gene sequence 
GGGCTCGTAGCTCAGCTTGGCTGGAGCGTTCGACTGATAATCGAAAGGTCATGAGTTCGA
ATCTCATCGGGCCCAttc
Downstream region at tRNA end position 
tctttaaatt
Secondary structure (Cloverleaf model)
>SRA1008833	Ile	GAT
                   a      Attc tctttaaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T A C T C     A
    T C G A        A      | | | | |     G
  T         C T C G       A T G A G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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