The detailed information of tRNA gene sequence


Sequence ID>SRA1008839
Genome IDSRR020491.39362
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 143
End posion on genome 218
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agcgattcag
tRNA gene sequence 
GCCCCGTTCGTCTAGAGGCCTAGGACGCCAGGTTCTCAACCTGGTAGCACGGGTTCGAAT
CCCGTACGGGGTACCA
Downstream region at tRNA end position 
cacgggccgg
Secondary structure (Cloverleaf model)
>SRA1008839	Glu	CTC
                   g      ACCA cacgggccgg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK