The detailed information of tRNA gene sequence


Sequence ID>SRA1008842
Genome IDSRR020491.40420
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 201
End posion on genome 112
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
aatctgcagc
tRNA gene sequence
GGAGAGGTGACCGAGTGGCCGATGGTGCGTGATTGGAAATCACGTGTGCGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
cacccattat
Secondary structure (Cloverleaf model)
>SRA1008842	Ser	GGA
                   c      GCCA cacccattat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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