The detailed information of tRNA gene sequence


Sequence ID>SRA1008866
Genome IDSRR020491.47107
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 130
End posion on genome 214
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcatccatag
tRNA gene sequence 
GCGGGGATCGCCTAGCTTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCtt
Downstream region at tRNA end position 
ttttcaagta
Secondary structure (Cloverleaf model)
>SRA1008866	Ser	GCT
                   g      GCtt ttttcaagta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    T       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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