The detailed information of tRNA gene sequence


Sequence ID>SRA1008869
Genome IDSRR020491.47554
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 158
End posion on genome 82
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggagctcgct
tRNA gene sequence 
GGCGACGTAGCTCAGCTGGTGAGAGCGCTCGACTCATAATCGAGAGGTCGACAGTTCGAA
TCTGTCCGTCGCTACAA
Downstream region at tRNA end position 
gcatcggctc
Secondary structure (Cloverleaf model)
>SRA1008869	Met	CAT
                   t      ACAA gcatcggctc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T G A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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