The detailed information of tRNA gene sequence


Sequence ID>SRA1008871
Genome IDSRR020491.47612
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 129
End posion on genome 54
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccctaccatt
tRNA gene sequence 
GGGGGCGTAGCTCATCTGGGAGAGCGTATCCCTTGCACGGATAAGGTAGCTGGTTCGATC
CCAGTCGCCTCCACCA
Downstream region at tRNA end position 
tagattttat
Secondary structure (Cloverleaf model)
>SRA1008871	Ala	TGC
                   t      ACCA tagattttat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     T G A C C     A
      C T A        A      + | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    T - A
                    A - T
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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