The detailed information of tRNA gene sequence


Sequence ID>SRA1008872
Genome IDSRR020491.47655
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 164
End posion on genome 241
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
attaaactta
tRNA gene sequence 
CGGCTGTTAGCTTCAACTGGATAGAGCGCTCGACTTCGGATCGAGAGGTTGCAGGTTCGA
GTCCTGCACAGCCGACCA
Downstream region at tRNA end position 
ttaggaaagg
Secondary structure (Cloverleaf model)
>SRA1008872	Arg	TCG
                   a      ACCA ttaggaaagg
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     T - A          T G
                    T     C G T C C     A
    C A A C        A      | | | | |     G
  T         T T C G       G C A G G     C
  G         + | | |                 T T
  G         G A G C
    A T A          G     AGGTT
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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