The detailed information of tRNA gene sequence


Sequence ID>SRA1008887
Genome IDSRR020491.52905
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 186
End posion on genome 111
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attaatattt
tRNA gene sequence 
AGGCAAGTGGCTCAATTGGTAGAGTGGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAAT
CCCTCCTTGCCTGCCA
Downstream region at tRNA end position 
aattaaagga
Secondary structure (Cloverleaf model)
>SRA1008887	Trp	CCA
                   t      GCCA aattaaagga
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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