The detailed information of tRNA gene sequence


Sequence ID>SRA1008932
Genome IDSRR020491.64937
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 122
End posion on genome 48
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cccggccttt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACtt
Downstream region at tRNA end position 
ggttagggag
Secondary structure (Cloverleaf model)
>SRA1008932	Pro	TGG
                   t      ACtt ggttagggag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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