The detailed information of tRNA gene sequence


Sequence ID>SRA1008952
Genome IDSRR020491.74514
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 114
End posion on genome 41
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttttgttc
tRNA gene sequence 
AGCGGGGTGGGGAAGTCAGGTCATCCCGCGGGCTCATAACCCGAAAATCAGTAGTTCAAA
TCTACTCCCCGCTAtgg
Downstream region at tRNA end position 
tttttctaaa
Secondary structure (Cloverleaf model)
>SRA1008952	Met	CAT
                   c      Atgg tttttctaaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A T C     A
      T G A        G      | | | | |     A
    C       A G G G       A G T A G     C
    A         + | |                 T T
    G       A T C C
      G T C        C     AAATC
                    G   A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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