The detailed information of tRNA gene sequence


Sequence ID>SRA1008964
Genome IDSRR020491.78501
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 183
End posion on genome 272
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
aaacagatgc
tRNA gene sequence
GGAGGGATGGGTGAGTGGTTGAAACCGACGGACTTGAAATCCGTTAAGGCTGCAAGGTCT
TCGGGGGTTCGAATCCCTCTCCCTCCGCCN
Downstream region at tRNA end position
gaataaacnn
Secondary structure (Cloverleaf model)
>SRA1008964	Ser	TGA
                   c      GCCN gaataaacnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    T       A A C C
      T G A        G     TAAGGCTGCAAGGTCTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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