The detailed information of tRNA gene sequence


Sequence ID>SRA1008977
Genome IDSRR020491.82520
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 77
End posion on genome 154
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacaaaattt
tRNA gene sequence 
GGATCCGTCGTCTAGCTTGGTTTGGATACCGCACTCACACTGCGGGGGTCAAGGGTTCAA
ATCCCTTCGGATCCACTA
Downstream region at tRNA end position 
gaatctttat
Secondary structure (Cloverleaf model)
>SRA1008977	Val	CAC
                   t      ACTA gaatctttat
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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