The detailed information of tRNA gene sequence


Sequence ID>SRA1008984
Genome IDSRR020491.86029
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 162
End posion on genome 76
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttttcttttT
tRNA gene sequence 
GCGGGAGTCGCCCAGCCTGGCCAACGGCGTAAGGTTCAGATCCTTATCTCCTAGGAGTTC
GTGGGTTCAAATCCCACTTCCCGCATtt
Downstream region at tRNA end position 
tttataattc
Secondary structure (Cloverleaf model)
>SRA1008984	Leu	CAG
                   T      ATtt tttataattc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T          T A
                    T     C A C C C     A
    C C G A        C      | | | | |     A
  T         C C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCTCCTAGGAGTTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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