The detailed information of tRNA gene sequence


Sequence ID>SRA1009010
Genome IDSRR020491.95153
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 140
End posion on genome 229
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caacaccttt
tRNA gene sequence 
GGAGGGGTGGCTGAGCGGTTGAAAGCACTGGTCTTGAAAACCAGCAATGGGGCAACTCAT
TCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
taatccttta
Secondary structure (Cloverleaf model)
>SRA1009010	Ser	TGA
                   t      GCCA taatccttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAATGGGGCAACTCATTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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