The detailed information of tRNA gene sequence


Sequence ID>SRA1009039
Genome IDSRR020491.104045
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 279
End posion on genome 206
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tagttatatt
tRNA gene sequence 
GGCTCTGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTTGTGTCGGTGGTTCAATT
CCGCCCGGAGCCACtt
Downstream region at tRNA end position 
aaaacccctt
Secondary structure (Cloverleaf model)
>SRA1009039	Phe	GAA
                   t      ACtt aaaacccctt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     A
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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