The detailed information of tRNA gene sequence


Sequence ID>SRA1009040
Genome IDSRR020491.104076
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 172
End posion on genome 258
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaatagttc
tRNA gene sequence 
GGAGGATTAGCTCTAACTGGTAAGACACCGGTCTTGAAAACCGGCGGCCTCACGGCCTTG
GGGGTTCGAGTCCCTCATCCTCCGCAA
Downstream region at tRNA end position 
tggagagttg
Secondary structure (Cloverleaf model)
>SRA1009040	Ser	TGA
                   c      GCAA tggagagttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    T         +   |                 T T
    G       A G A C
      G T A        A     CGGCCTCACGGCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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