The detailed information of tRNA gene sequence


Sequence ID>SRA1009043
Genome IDSRR020491.104377
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 253
End posion on genome 178
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttttttccga
tRNA gene sequence 
GCTCCTGTGGTGTAGTCCGGCCAAGCATATTGGCTTCTCAAGCCAATGATCCCGGGTTCA
AATCCCGGCGGGAGCAtat
Downstream region at tRNA end position 
ttcatttcaa
Secondary structure (Cloverleaf model)
>SRA1009043	Glu	CTC
                   a      Atat ttcatttcaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        A     TGATC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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