The detailed information of tRNA gene sequence


Sequence ID>SRA1009052
Genome IDSRR020491.108601
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 169
End posion on genome 256
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctgcgcgac
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGATTGCGACGGTCTTGAAAACCGTTGAGCCTCACGGCTTC
GGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
ccaccggcag
Secondary structure (Cloverleaf model)
>SRA1009052	Ser	TGA
                   c      GCCA ccaccggcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGAGCCTCACGGCTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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