The detailed information of tRNA gene sequence


Sequence ID>SRA1009053
Genome IDSRR020491.108601
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 15
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgggcccga
tRNA gene sequence 
GGAGAGGTGGCCGAGTCTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGTCAAAAGC
TCATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tccgaatccc
Secondary structure (Cloverleaf model)
>SRA1009053	Ser	GCT
                   a      GCCA tccgaatccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C G A        G     TATGGGTCAAAAGCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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