The detailed information of tRNA gene sequence


Sequence ID>SRA1009063
Genome IDSRR020491.110714
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 28
End posion on genome 118
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
tttccttttt
tRNA gene sequence
GGAGGGGTGGCAGAGTCTGGCTGATTGCACTGGTCTTGAAAACCAGCATGTCTTATGGGC
ATCGGGGGTTCGAATCCCTCCCCCTCCGCAA
Downstream region at tRNA end position
cataacttta
Secondary structure (Cloverleaf model)
>SRA1009063	Ser	TGA
                   t      GCAA cataacttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     CATGTCTTATGGGCATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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