The detailed information of tRNA gene sequence


Sequence ID>SRA1009077
Genome IDSRR020491.114304
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 260
End posion on genome 187
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggttcgacat
tRNA gene sequence 
GCTCCGATAGCTCAGCCTGGTAGAGCGTTACATTGGTAATGTAAAGGTCGTGGGTTCAGA
TCCCGCTCGGAGCTtta
Downstream region at tRNA end position 
gtaattctta
Secondary structure (Cloverleaf model)
>SRA1009077	Thr	GGT
                   t      Ttta gtaattctta
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C G C C C     G
      C G A        A      | + | | |     A
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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