The detailed information of tRNA gene sequence


Sequence ID>SRA1009087
Genome IDSRR020491.116106
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 64
End posion on genome 139
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccaccaaagc
tRNA gene sequence 
GCCCCTGTAGCTCAGAGGATAGAGCGGCGGCGTCCTAAGTCGCGCGTCGGGGGTTCGAGT
CCCTCCAGGGGTACCA
Downstream region at tRNA end position 
cgtaggagcg
Secondary structure (Cloverleaf model)
>SRA1009087	Arg	CCT
                   c      ACCA cgtaggagcg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     GCGTC
                    G - C
                    C - G
                    G - C
                    G + T
                    C - G
                  G       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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